BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003F09SP1|AL425160
(999 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1503 1864 0.0
>3x_Contig1503
Length = 10719
Score = 1864 bits (938), Expect = 0.0
Identities = 983/999 (98%), Gaps = 5/999 (0%)
Strand = Plus / Minus
Query: 1 atcgttcttcaacgtctatcagagacaaattttataaagaagagtttaatcaaacagagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2174 atcgttcttcaacgtctatcagagacaaattttataaagaagagtttaatcaaacagagg 2115
Query: 61 tgactaatttagatgctccatccattccggattattataaaggctcgaaaatcgtcacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2114 tgactaatttagatgctccatccattccggattattataaaggctcgaaaatcgtcacca 2055
Query: 121 gcaacactttaaactctaatactatcactgactcagatgtgccctcttcatatatgaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2054 gcaacactttaaactctaatactatcactgactcagatgtgccctcttcatatatgaaca 1995
Query: 181 acggcagtgtatgctgcaacaacagacaaaacaacatgccgtaraaccaccgcaargact 240
|||||||||| |||||||||||||| || || ||||||| |||||||||| ||||
Sbjct: 1994 acggcagtgt-tgctgcaacaacagcaaacac----tgccgtagtaccaccgcaaggact 1940
Query: 241 agcaaccatggcagcagcaaatagttatcaaagacacagtaacaataacgatgccacttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1939 agcaaccatggcagcagcaaatagttatcaaagacacagtaacaataacgatgccacttt 1880
Query: 301 gcttcataatgctgttccaaagcagccgtactccgctattaaccaaagtggtaccaattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1879 gcttcataatgctgttccaaagcagccgtactccgctattaaccaaagtggtaccaattc 1820
Query: 361 aagtatgaattcctcttctagggctttgtcttctggtagaattacggcaccaaacaataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1819 aagtatgaattcctcttctagggctttgtcttctggtagaattacggcaccaaacaataa 1760
Query: 421 ttacagccagcagaatttctctcagatgggagaaattggttcgttggctccatcatcaga 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1759 ttacagccagcagaatttctctcagatgggagaaattggttcgttggctccatcatcagt 1700
Query: 481 aaatgctgaacacatagccggtggtagtagtggggtaatagcatcagaccttcaacaggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1699 ttatgctgaacacatagccggtggtagtagtggggtaatagcatcagaccttcaacaggg 1640
Query: 541 caacaatagaggacagtcacaagatgaactcacacaacctccaaagactcaacaagacgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1639 caacaatagaggacagtcacaagatgaactcacacaacctccaaagactcaacaagacgt 1580
Query: 601 attgcaggatattatcaatggcgtcttatccgaggatgaagaagaattcttgaaacaaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1579 attgcaggatattatcaatggcgtcttatccgaggatgaagaagaattcttgaaacaaaa 1520
Query: 661 tactgttgatcctagtgaaagacctgcaatggacacttttgatgatgatggaatcaacga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1519 tactgttgatcctagtgaaagacctgcaatggacacttttgatgatgatggaatcaacga 1460
Query: 721 cgatgactctcagttcacatcggtctctcaaagaggtatcaatccaaattactaccaggg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1459 cgatgactctcagttcacatcggtctctcaaagaggtatcaatccaaattactaccaggg 1400
Query: 781 aagaggtggtgtacagtatatccctcctactcatggtccactacagaaccaattacaagg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1399 aagaggtggtgtacagtatatccctcctactcatggtccactacagaaccaattacaagg 1340
Query: 841 tcaagtacaaaatcctgctatggctcaaggaatggttccaaatggtatgcatcctacgca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1339 tcaagtacaaaatcctgctatggctcaaggaatggttccaaatggtatgcatcctacgca 1280
Query: 901 accgccagttgtcgggggacagtwttaccctccacttcctaaccaagcaggtccgcaaca 960
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1279 accgccagttgtcgggggacagtattaccctccacttcctaaccaagcaggtccgcaaca 1220
Query: 961 aggatactaccaccctccgccactaccagtwcagcaaca 999
|||||||||||||||||||||||||||||| ||||||||
Sbjct: 1219 aggatactaccaccctccgccactaccagtacagcaaca 1181
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7088
Number of Sequences: 1807
Number of extensions: 7088
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 999
length of database: 10,358,551
effective HSP length: 16
effective length of query: 983
effective length of database: 10,329,639
effective search space: 10154035137
effective search space used: 10154035137
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)